Motif HL_02782.1 Version HL_02782.1 of this group appears in releases 3.95 to 3.95
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-6 | 4-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8KAJ_003 | 8KAJ | 0.0000 | 0 | I | tracrRNA | C | 86 | G | 87 | A | 88 | G | 89 | U | 90 | C | 91 | G | 92 | cWW | ncSH | |
| 2 | HL_7MDL_001 | 7MDL | 0.4408 | 1 | E | Selenocysteine transfer RNA | A | 14||A | G | 15||A | U | 16||A | G | 19||A | U | 20||A | C | 20||A|A | U | 21||A | cWW | ncWW | ncSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGAGUCG | 1 |
| AGUGGUCU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAGUC | 1 |
| GUGGUC | 1 |
Release history
| Release | 3.95 |
|---|---|
| Date | 2025-03-26 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F-F
- Heat map statistics
- Min 0.44 | Avg 0.22 | Max 0.44
Coloring options: