Motif HL_03862.1 Version HL_03862.1 of this group appears in releases 3.88 to 3.88
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-6 | 4-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3IGI_010 | 3IGI | 0.0000 | 2 | A | Group II catalytic intron D1-D4-3 | C | 305 | U | 306 | G | 307 | U | 308 | C | 310 | C | 312 | A | 313 | G | 314 | ncWW | ncWS | ||
| 2 | HL_6DB9_002 | 6DB9 | 0.7869 | 2 | R | RNA (60-MER) | G | 36 | G | 37 | U | 38 | G | 39 | A | 41 | U | 42 | A | 44 | C | 45 | cWW | ntsS | cSs |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUGUUCGCAG | 1 |
| GGUGAAUGAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGUUCGCA | 1 |
| GUGAAUGA | 1 |
Release history
| Release | 3.88 |
|---|---|
| Date | 2024-09-11 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F-F-F
- Heat map statistics
- Min 0.79 | Avg 0.39 | Max 0.79
Coloring options: