Motif HL_05797.1 Version HL_05797.1 of this group appears in releases 0.3 to 1.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2XZM_013 | 2XZM | 0.0000 | 0 | A | 18S RRNA | C | 483 | U | 484 | U | 485 | A | 486 | C | 487 | G | 488 | cWW |
| 2 | HL_3U5F_013 | 3U5F | 0.9676 | 0 | 6 | 18S rRNA | C | 491 | A | 492 | U | 493 | U | 494 | C | 495 | G | 496 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUUACG | 1 |
| CAUUCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUAC | 1 |
| AUUC | 1 |
Release history
| Release | 0.3 | 0.4 | 0.5 | 0.6 | 0.7 | 0.8 | 1.0 |
|---|---|---|---|---|---|---|---|
| Date | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-03-04 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_05797.1 | Only in the parent motif |
|---|---|---|---|
| HL_18943.1 Compare | HL_2XZM_013 | HL_3U5F_013 | HL_3OWZ_004, HL_2QBG_002 |
Children motifs
| Child motif | Common motif instances | Only in HL_05797.1 | Only in the child motif |
|---|---|---|---|
| HL_97512.1 Compare | HL_3U5F_013 | HL_2XZM_013 | HL_2QBG_002 |
| HL_52109.1 Compare | HL_2XZM_013 | HL_3U5F_013 |
- Annotations
-
- (2)
- Basepair signature
- cWW-R-R-R
- Heat map statistics
- Min 0.97 | Avg 0.48 | Max 0.97
Coloring options: