Motif HL_06375.1 Version HL_06375.1 of this group appears in releases 0.1 to 0.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-7 | 3-8 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2NQP_001 | 2NQP | 0.2991 | 3 | F | G | 12 | G | 13 | A | 14 | A | 15 | G | 19 | U | 20 | A | 20|||A | G | 21 | A | 22 | C | 23 | cWW | tSH | cWS | |
| 2 | HL_2NR0_011 | 2NR0 | 0.0000 | 3 | H | G | 12 | G | 13 | A | 14 | A | 15 | G | 19 | U | 20 | A | 20|||A | G | 21 | A | 22 | C | 23 | cWW | tSH | cWS | |
| 3 | HL_2NR0_001 | 2NR0 | 0.2729 | 3 | E | G | 12 | G | 13 | A | 14 | A | 15 | G | 19 | U | 20 | A | 20|||A | G | 21 | A | 22 | C | 23 | cWW | ntSH | cWS | |
| 4 | HL_2NRE_001 | 2NRE | 0.9553 | 3 | F | G | 12 | G | 13 | A | 14 | A | 15 | G | 19 | U | 20 | A | 20|||A | G | 21 | A | 22 | C | 23 | ncWW | ntSH | ncWS | ncWS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGAAUUGGUAGAC | 3 |
| GGAAUCGGUAGAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAAUUGGUAGA | 3 |
| GAAUCGGUAGA | 1 |
Release history
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_06375.1 | Only in the child motif |
|---|---|---|---|
| HL_42553.1 Compare | HL_2NR0_001, HL_2NRE_001 | HL_2NR0_011, HL_2NQP_001 |
Coloring options: