Motif HL_06483.1 Version HL_06483.1 of this group appears in releases 3.12 to 3.17
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | 2-8 | 3-7 | 5-6 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1QTQ_001 | 1QTQ | 0.0000 | 2 | B | tRNA | C | 912 | A | 913 | A | 914 | G | 915 | G | 919 | U | 920 | A | 921 | A | 922 | G | 923 | cWW | tSH | cWS | cSH | |
| 2 | HL_4JXZ_001 | 4JXZ | 0.7196 | 2 | B | RNA (71-MER) | C | 912 | A | 913 | A | 914 | G | 915 | G | 919 | U | 920 | A | 921 | A | 922 | G | 923 | cWW | tSH | cWS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAAGCGGUAAG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAGCGGUAA | 2 |
- Annotations
- Basepair signature
- cWW-tSH-cWS-cSH-R
- Heat map statistics
- Min 0.72 | Avg 0.36 | Max 0.72
Coloring options: