#SLoop idPDBDisc#Non-coreChain(s) 1 2 3 4 5 6 7 8 9 10 11 121-127-11
1 HL_4MGN_0054MGN0.14121CG51G52G53C54G55G56U57G58G59G60A61C63cWWtWH
2 HL_4JRC_0024JRC0.00001BG51G52G53C54G55G56U57G58G59G60A61C63cWWtWH
3 HL_4LCK_0054LCK0.34681CG52G53A54U55A56G57U58G59A60A61A62C64cWWtWH

3D structures

Complete motif including flanking bases
SequenceCounts
GGGCGGUGGGAGC2
GGAUAGUGAAAGC1
Non-Watson-Crick part of the motif
SequenceCounts
GGCGGUGGGAG2
GAUAGUGAAAG1

Release history

Release1.81.91.101.111.121.131.141.151.161.17
Date2013-11-042013-12-072014-01-042014-02-012014-03-012014-03-292014-04-272014-06-152014-07-262014-09-06
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in HL_06997.2Only in the parent motif
HL_06997.1
Compare
HL_4JRC_002, HL_4LCK_005HL_4MGN_005

Children motifs

Child motifCommon motif instancesOnly in HL_06997.2Only in the child motif
HL_85551.1
Compare
HL_4JRC_002, HL_4MGN_005HL_4LCK_005HL_4TZZ_005, HL_4TZZ_010
Annotations
  • (3)
  • Basepair signature
    cWW-tWH-R-R-R-R-R-R-R
    Heat map statistics
    Min 0.14 | Avg 0.19 | Max 0.36
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