Motif HL_07480.2 Version HL_07480.2 of this group appears in releases 3.98 to 3.98
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_9MTS_101 | 9MTS | 0.1175 | 4 | 1x | tRNA | A | 12 | A | 13 | A | 14 | G | 15 | C | 16 | A | 22 | U | 23 | cWW | tSH |
| 2 | HL_1U0B_001 | 1U0B | 0.0000 | 4 | A | tRNA | A | 12 | A | 13 | A | 14 | G | 15 | C | 16 | A | 22 | U | 23 | cWW | tSH |
| 3 | HL_1B23_001 | 1B23 | 0.1937 | 4 | R | tRNA | A | 12 | A | 13 | A | 14 | G | 15 | C | 16 | A | 22 | U | 23 | cWW | ntSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AAAGCGG(H2U)(H2U)AU | 1 |
| AAAGCGGUUAU | 1 |
| AAAGCGGAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAGCGG(H2U)(H2U)A | 2 |
| AAGCGGUUA | 1 |
Release history
| Release | 3.98 |
|---|---|
| Date | 2025-06-18 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-tSH-F-F-F
- Heat map statistics
- Min 0.12 | Avg 0.12 | Max 0.21
Coloring options: