Motif HL_07923.1 Version HL_07923.1 of this group appears in releases 0.1 to 0.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-3 | 2-10 | 3-9 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3O30_002 | 3O30 | 0.0000 | 3 | 1 | 18S ribosomal RNA | C | 70 | A | 71 | A | 72 | U | 73 | U | 74 | A | 76 | U | 77 | A | 80 | G | 81 | U | 82 | G | 83 | cWW | ncSH | ncWW | ncWW |
| 2 | HL_1FJG_023 | 1FJG | 1.0429 | 1 | A | SSU rRNA | C | 1027 | C | 1028 | C | 1029 | C | 1030 | G | 1030|||A | G | 1030|||C | A | 1030|||D | G | 1031 | G | 1032 | G | 1033 | G | 1034 | cWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAAUUUAUACAGUG | 1 |
| CCCCGCGAGGGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAUUUAUACAGU | 1 |
| CCCGCGAGGG | 1 |
Release history
| Release | 0.1 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_07923.1 | Only in the child motif |
|---|---|---|---|
| HL_22711.1 Compare | HL_1FJG_023 | HL_3O30_002 | |
| HL_05139.1 Compare | HL_3O30_002 | HL_1FJG_023 | HL_1J2B_001 |
Coloring options: