Motif HL_08128.1 Version HL_08128.1 of this group appears in releases 3.89 to 3.90
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5J7L_169 | 5J7L | 0.0000 | 2 | Mini UNCG with extended bulge | DA | LSU rRNA | C | 1451 | G | 1452 | G | 1455 | G | 1456 | U | 1457 | U | 1458 | G | 1459 | cWW |
| 2 | HL_8VTW_036 | 8VTW | 0.5499 | 1 | Mini UNCG with extended bulge | 1A | LSU rRNA | C | 1451 | A | 1452 | G | 1455 | G | 1456 | A | 1457 | C | 1458 | G | 1459 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGACGGUUG | 1 |
| CAUGGACG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GACGGUU | 1 |
| AUGGAC | 1 |
- Annotations
-
- Mini UNCG with extended bulge (2)
- Basepair signature
- cWW-F-F-F-F
- Heat map statistics
- Min 0.55 | Avg 0.27 | Max 0.55
Coloring options: