Motif HL_08566.1 Version HL_08566.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4BTS_114 | 4BTS | 0.0000 | 1 | DA | SSU rRNA | C | 225 | A | 226 | G | 227 | A | 229 | A | 230 | U | 231 | G | 232 | cWW | ncWW |
| 2 | HL_5FDU_025 | 5FDU | 0.8212 | 1 | 1A | LSU rRNA | C | 931 | C | 932 | C | 933 | C | 935 | C | 936 | A | 937 | G | 938 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAGCAAUG | 1 |
| CCCACCAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGCAAU | 1 |
| CCACCA | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-R-R-R-R
- Heat map statistics
- Min 0.82 | Avg 0.41 | Max 0.82
Coloring options: