Motif HL_10751.1 Version HL_10751.1 of this group appears in releases 3.2 to 3.2
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-6 | 6-7 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1H4S_001 | 1H4S | 0.2693 | 4 | T | tRNA | C | 13 | A | 14 | G | 15 | C | 17 | C | 17|||A | A | 21 | G | 22 | cWW | |||
| 2 | HL_1J1U_004 | 1J1U | 0.0000 | 4 | B | tRNA(Tyr) | C | 513||||4_556 | A | 514||||4_556 | G | 515||||4_556 | C | 517||||4_556 | U | 518||||4_556 | A | 522||||4_556 | G | 523||||4_556 | cWW | ncWS | ||
| 3 | HL_1J1U_001 | 1J1U | 0.0000 | 4 | B | tRNA(Tyr) | C | 513 | A | 514 | G | 515 | C | 517 | U | 518 | A | 522 | G | 523 | cWW | ncWS | ||
| 4 | HL_4V9Q_213 | 4V9Q | 0.2762 | 4 | DV | tRNA | C | 13 | A | 14 | G | 15 | C | 17 | U | 17|||A | A | 21 | G | 22 | cWW | ncSH | ||
| 5 | HL_2ZUE_001 | 2ZUE | 0.2991 | 5 | B | tRNA-Arg | U | 913 | A | 914 | G | 915 | C | 917 | A | 917|||A | A | 921 | G | 922 | cWW | cWS | ||
| 6 | HL_4WT8_215 | 4WT8 | 0.4923 | 4 | D4 | tRNA | C | 13 | A | 14 | G | 15 | C | 17 | U | 18 | A | 22 | G | 23 | cWW | ncWS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAGCCUGGUAG | 4 |
| CAGCCCGGUAG | 1 |
| UAGCCAGGACAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGCCUGGUA | 4 |
| AGCCCGGUA | 1 |
| AGCCAGGACA | 1 |
Release history
| Release | 3.2 |
|---|---|
| Date | 2018-09-26 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-cWS-R-R-R
- Heat map statistics
- Min 0.27 | Avg 0.30 | Max 0.55
Coloring options: