Motif HL_11061.1 Version HL_11061.1 of this group appears in releases 0.1 to 0.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 1-5 | 3-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2NZ4_014 | 2NZ4 | 0.1038 | 8 | S | GlmS ribozyme | A | 31 | G | 32 | G | 33 | A | 42 | U | 43 | cWW | |
| 2 | HL_2NZ4_010 | 2NZ4 | 0.0834 | 8 | R | GlmS ribozyme | A | 31 | G | 32 | G | 33 | A | 42 | U | 43 | cWW | |
| 3 | HL_3DHS_003 | 3DHS | 0.0866 | 1 | A | RNase P RNA | C | 260 | A | 261 | A | 262 | A | 271 | G | 272 | cWW | ntSH |
| 4 | HL_2NZ4_002 | 2NZ4 | 0.0000 | 8 | P | GlmS ribozyme | A | 31 | G | 32 | G | 33 | A | 42 | U | 43 | cWW | |
| 5 | HL_2NZ4_006 | 2NZ4 | 0.6073 | 8 | Q | GlmS ribozyme | A | 31 | G | 32 | G | 33 | A | 42 | U | 43 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AGGUGGGGUUUAU | 4 |
| CAAAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGUGGGGUUUA | 4 |
| AAAA | 1 |
Release history
| Release | 0.1 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_11061.1 | Only in the child motif |
|---|---|---|---|
| HL_11061.2 Compare | HL_2NZ4_014, HL_2NZ4_006, HL_2NZ4_010, HL_2NZ4_002 | HL_3DHS_003 |
Coloring options: