Motif HL_11363.1 Version HL_11363.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-7 | 4-6 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1NBS_004 | 1NBS | 0.0000 | 2 | B | RNase P class B | C | 96 | G | 97 | A | 98 | G | 100 | C | 102 | A | 103 | U | 104 | A | 105 | A | 106 | G | 107 | cWW | ntSH | ntHW | ntSW |
| 2 | HL_8P9A_234 | 8P9A | 0.8418 | 6 | sR | SSU rRNA | G | 486 | G | 488 | C | 490 | C | 491 | G | 496 | G | 497 | G | 498 | U | 499 | C | 500 | U | 501 | ncWWa | ncSW | ncWS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGAAGUCAUAAG | 1 |
| GGGCCCAUUCGGGUCU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAAGUCAUAA | 1 |
| GGCCCAUUCGGGUC | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Heat map statistics
- Min 0.84 | Avg 0.42 | Max 0.84
Coloring options: