Motif HL_11520.1 Version HL_11520.1 of this group appears in releases 0.1 to 0.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-7 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3O58_071 | 3O58 | 0.0000 | 1 | 1 | LSU rRNA | G | 3303 | A | 3305 | U | 3306 | A | 3307 | C | 3308 | G | 3309 | A | 3310 | C | 3311 | cWW | cSW |
| 2 | HL_2ZJR_066 | 2ZJR | 0.6154 | 1 | X | LSU rRNA | G | 2794 | A | 2796 | G | 2797 | A | 2798 | C | 2799 | C | 2800 | A | 2801 | C | 2802 | cWW | cSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUAUACGAC | 1 |
| GAAGACCAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAUACGA | 1 |
| AAGACCA | 1 |
Release history
| Release | 0.1 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_11520.1 | Only in the child motif |
|---|---|---|---|
| HL_54261.1 Compare | HL_3O58_071, HL_2ZJR_066 | HL_1S72_069, HL_3PYO_068, HL_2QBG_070 |
Coloring options: