Motif HL_11805.1 Version HL_11805.1 of this group appears in releases 3.2 to 3.47

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3		4		5		6		7		8		9		10		11	1-11	2-10	6-9
1	HL_4Y4O_158	4Y4O	0.0000	0	2A	LSU rRNA	G	2303	G	2304	A	2305	C	2306	G	2307	G	2308	A	2309	A	2310	A	2311	U	2312	C	2313	cWW	ncWWa
2	HL_5J7L_188	5J7L	0.3233	0	DA	LSU rRNA	G	2303	G	2304	U	2305	C	2306	G	2307	G	2308	A	2309	C	2310	A	2311	U	2312	C	2313	cWW	ncWWa	ncWH

3D structures

Complete motif including flanking bases

Sequence	Counts
GGACGGAAAUC	1
GGUCGGACAUC	1

Non-Watson-Crick part of the motif

Sequence	Counts
GACGGAAAU	1
GUCGGACAU	1

Release history

Release	3.3	3.4	3.5	3.6	3.7	3.8	3.9	3.10	3.2	3.11	3.12	3.13	3.14	3.15	3.16	3.17	3.18	3.19	3.20	3.21	3.22	3.23	3.24	3.25	3.26	3.27	3.28	3.29	3.30	3.31	3.32	3.33	3.34	3.35	3.36	3.37	3.38	3.39	3.40	3.41	3.42	3.43	3.44	3.45	3.46	3.47
Date	2018-03-08	2018-04-06	2018-05-04	2018-06-01	2018-06-29	2018-07-27	2018-08-24	2018-09-21	2018-09-26	2018-10-19	2018-11-16	2018-12-14	2019-01-11	2019-02-08	2019-03-08	2019-04-05	2019-05-03	2019-05-31	2019-06-28	2019-07-26	2019-08-23	2019-09-19	2019-10-16	2019-11-13	2019-12-11	2020-01-08	2020-02-05	2020-03-04	2020-04-01	2020-04-29	2020-05-27	2020-06-24	2020-07-22	2020-08-19	2020-09-16	2020-10-14	2020-11-11	2020-12-09	2021-01-06	2021-02-03	2021-03-03	2021-03-31	2021-04-28	2021-05-26	2021-06-23	2021-07-21
Status	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	New id, no parents	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (2)
Basepair signature: cWW-R-R-R-R-R-R-R-R
Heat map statistics: Min 0.32 | Avg 0.16 | Max 0.32

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