Motif HL_13651.1 Version HL_13651.1 of this group appears in releases 0.2 to 0.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2QBZ_002 | 2QBZ | 0.0000 | 3 | X | M-Box RNA, ykoK riboswitch aptamer | C | 99 | G | 100 | U | 104 | A | 105 | A | 106 | G | 107 | cWW | tSH |
| 2 | HL_1F1T_001 | 1F1T | 0.6408 | 0 | A | MALACHITE GREEN APTAMER RNA | C | 14 | G | 15 | A | 16 | G | 17 | A | 18 | G | 19 | cWW | ntSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGACAUAAG | 1 |
| CGAGAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GACAUAA | 1 |
| GAGA | 1 |
Release history
| Release | 0.2 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, 2 parents |
Parent motifs
| Parent motif | Common motif instances | Only in HL_13651.1 | Only in the parent motif |
|---|---|---|---|
| HL_85712.1 Compare | HL_2QBZ_002 | HL_1F1T_001 | |
| HL_78722.1 Compare | HL_1F1T_001 | HL_2QBZ_002 | HL_2ZJR_008, HL_3O58_003, HL_2QBG_010, HL_1S72_008 |
Children motifs
| Child motif | Common motif instances | Only in HL_13651.1 | Only in the child motif |
|---|---|---|---|
| HL_60420.1 Compare | HL_1F1T_001 | HL_2QBZ_002 | |
| HL_37962.1 Compare | HL_2QBZ_002 | HL_1F1T_001 |
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