Motif HL_60420.1 Version HL_60420.1 of this group appears in releases 0.3 to 0.5
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1F1T_001 | 1F1T | 0 | 0 | A | MALACHITE GREEN APTAMER RNA | C | 14 | G | 15 | A | 16 | G | 17 | A | 18 | G | 19 | cWW | ntSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGAGAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAGA | 1 |
Release history
Parent motifs
| Parent motif | Common motif instances | Only in HL_60420.1 | Only in the parent motif |
|---|---|---|---|
| HL_13651.1 Compare | HL_1F1T_001 | HL_2QBZ_002 |
Children motifs
| Child motif | Common motif instances | Only in HL_60420.1 | Only in the child motif |
|---|---|---|---|
| HL_84353.1 Compare | HL_1F1T_001 | HL_4FAW_004 |
- Annotations
-
- (1)
- Basepair signature
- cWW-tSH-R-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
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