Motif HL_14013.1 Version HL_14013.1 of this group appears in releases 0.3 to 0.8
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2QUX_002 | 2QUX | 0.0000 | 3 | F | RNA (25-MER) | G | 10 | A | 11 | A | 13 | G | 15 | C | 17 | cWW | |
| 2 | HL_3U5H_002 | 3U5H | 0.9906 | 1 | 5 | LSU rRNA | C | 69 | A | 70 | A | 71 | C | 72 | G | 74 | cWW | cSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUAUGGC | 1 |
| CAACCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUAUGG | 1 |
| AACC | 1 |
Release history
| Release | 0.3 | 0.4 | 0.5 | 0.6 | 0.7 | 0.8 |
|---|---|---|---|---|---|---|
| Date | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_14013.1 | Only in the parent motif |
|---|---|---|---|
| HL_95727.2 Compare | HL_2QUX_002 | HL_3U5H_002 | HL_2AW7_023, HL_2QUX_005, HL_2QUX_004, HL_2QUX_006, HL_2QUX_001, HL_2QUX_003, HL_3O30_010 |
Children motifs
| Child motif | Common motif instances | Only in HL_14013.1 | Only in the child motif |
|---|---|---|---|
| HL_19226.1 Compare | HL_2QUX_002 | HL_3U5H_002 | |
| HL_80746.1 Compare | HL_3U5H_002 | HL_2QUX_002 |
Coloring options: