Motif HL_14879.1 Version HL_14879.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3IVK_003 | 3IVK | 0.0000 | 2 | Fab BL3-6 binding hairpin with tSW | M | G | 59 | A | 61 | C | 63 | A | 64 | C | 65 | cWW | tSW |
| 2 | HL_4KZD_001 | 4KZD | 0.0812 | 2 | Fab BL3-6 binding hairpin with tSW | R | G | 37 | A | 39 | C | 41 | A | 42 | C | 43 | cWW | tSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAAACAC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAACA | 2 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Fab BL3-6 binding hairpin with tSW (2)
- Basepair signature
- cWW-tSW-R
- Heat map statistics
- Min 0.08 | Avg 0.04 | Max 0.08
Coloring options: