Motif HL_15708.4 Version HL_15708.4 of this group appears in releases 3.88 to 3.88
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 1-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8C3A_017 | 8C3A | 0.6754 | 1 | 1 | LSU rRNA | C | 729 | A | 730 | U | 732 | A | 733 | G | 734 | cWW | |
| 2 | HL_2A64_001 | 2A64 | 0.0000 | 1 | A | RNase P class B | G | 31 | G | 32 | U | 34 | U | 35 | C | 36 | cWW | |
| 3 | HL_4LFB_033 | 4LFB | 0.7449 | 1 | GNRA variation | A | SSU rRNA | C | 522 | A | 523 | C | 525 | C | 526 | 7MG | 527 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAUUAG | 1 |
| GGUUUC | 1 |
| CAGCC(7MG) | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUUA | 1 |
| GUUU | 1 |
| AGCC | 1 |
Release history
| Release | 3.88 |
|---|---|
| Date | 2024-09-11 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- GNRA variation (1)
- Basepair signature
- cWW-F-F
- Heat map statistics
- Min 0.68 | Avg 0.54 | Max 0.99
Coloring options: