Motif HL_15846.1 Version HL_15846.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 1-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4IOA_003 | 4IOA | 0.1263 | 1 | X | LSU rRNA | G | 121 | G | 122 | A | 124 | A | 125 | C | 126 | cWW |
| 2 | HL_5FDU_003 | 5FDU | 0.0954 | 1 | 1A | LSU rRNA | G | 121 | G | 122 | A | 124 | A | 125 | C | 126 | cWW |
| 3 | HL_5J7L_136 | 5J7L | 0.0000 | 1 | DA | LSU rRNA | G | 123 | G | 124 | A | 126 | A | 127 | C | 128 | cWW |
| 4 | HL_3J9W_038 | 3J9W | 0.2531 | 1 | BA | LSU rRNA | G | 122 | G | 123 | A | 125 | A | 126 | C | 127 | cWW |
| 5 | HL_2ZNI_004 | 2ZNI | 0.7800 | 2 | D | bacterial tRNA | C | 13 | G | 14 | A | 18 | U | 19 | G | 21 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGAAAC | 3 |
| GGGAAC | 1 |
| CGAAUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAAA | 3 |
| GGAA | 1 |
| GAAUA | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: