Motif HL_16583.1 Version HL_16583.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 1-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6IV9_001 | 6IV9 | 0.0000 | 1 | B | crRNA (50-MER) | A | -21 | A | -20 | A | -19 | U | -18 | U | -16 | cWW |
| 2 | HL_4KR9_004 | 4KR9 | 0.9092 | 1 | X | RNA (39-MER) | G | 19 | G | 20 | A | 21 | A | 22 | C | 24 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AAAUUU | 1 |
| GGAAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAUU | 1 |
| GAAA | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F
- Heat map statistics
- Min 0.91 | Avg 0.45 | Max 0.91
Coloring options: