Motif HL_16845.4 Version HL_16845.4 of this group appears in releases 3.8 to 3.25
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_361D_001 | 361D | 1.0302 | 1 | A | RNA (20-mer) | G | 86 | G | 87 | C | 88 | A | 89|||A | C | 90 | cWW | ntSH | |
| 2 | HL_4WF9_048 | 4WF9 | 0.0000 | 2 | X | LSU rRNA | C | 2236 | U | 2237 | A | 2239 | C | 2241 | G | 2242 | ncWW | ||
| 3 | HL_5J7L_185 | 5J7L | 0.5298 | 2 | DA | LSU rRNA | G | 2209 | U | 2210 | A | 2212 | C | 2214 | C | 2215 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGCGAC | 1 |
| CUUAUCG | 1 |
| GUAAUCC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GCGA | 1 |
| UUAUC | 1 |
| UAAUC | 1 |
Release history
| Release | 3.8 | 3.9 | 3.10 | 3.11 | 3.12 | 3.13 | 3.14 | 3.15 | 3.16 | 3.17 | 3.18 | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-10-19 | 2018-11-16 | 2018-12-14 | 2019-01-11 | 2019-02-08 | 2019-03-08 | 2019-04-05 | 2019-05-03 | 2019-05-31 | 2019-06-28 | 2019-07-26 | 2019-08-23 | 2019-09-19 | 2019-10-16 | 2019-11-13 |
| Status | Updated, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: