Motif HL_18213.1 Version HL_18213.1 of this group appears in releases 0.1 to 0.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-7 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2DER_002 | 2DER | 0.0000 | 1 | C | tRNA | C | 31 | C | 32 | U | 33 | U | 35 | C | 36 | A | 37 | C | 38 | G | 39 | cWW | |
| 2 | HL_2DER_005 | 2DER | 0.0344 | 1 | D | tRNA | C | 31 | C | 32 | U | 33 | U | 35 | C | 36 | A | 37 | C | 38 | G | 39 | cWW | |
| 3 | HL_3O58_063 | 3O58 | 0.5457 | 2 | 1 | 25S ribosomal RNA | A | 2896 | A | 2897 | C | 2899 | G | 2901 | A | 2902 | A | 2903 | U | 2904 | U | 2905 | cWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCUUUCACG | 2 |
| AAGCAGAAUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUUUCAC | 2 |
| AGCAGAAU | 1 |
Release history
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_18213.1 | Only in the child motif |
|---|---|---|---|
| HL_45411.1 Compare | HL_2DER_005 | HL_2DER_002, HL_3O58_063 |
Coloring options: