Motif HL_19337.1 Version HL_19337.1 of this group appears in releases 3.6 to 3.11
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 1-4 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4ILL_001 | 4ILL | 0.7494 | 3 | R | RNA (24-mer) | U | 8 | C | 10 | A | 12 | A | 14 | cWW | |
| 2 | HL_6FQ3_001 | 6FQ3 | 0.0427 | 1 | B | RNA (13-mer) | U | 5 | C | 7 | A | 8 | A | 9 | cWW | |
| 3 | HL_6FQL_001 | 6FQL | 0.0000 | 1 | B | RNA (13-mer) | U | 5 | U | 7 | A | 8 | A | 9 | cWW | |
| 4 | HL_5TBW_045 | 5TBW | 0.2929 | 1 | 1 | LSU rRNA | G | 2110 | U | 2112 | A | 2113 | C | 2114 | cWW | |
| 5 | HL_4V8P_127 | 4V8P | 0.4091 | 1 | D1 | LSU rRNA | G | 2106 | A | 2108 | G | 2109 | C | 2110 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UACUAUA | 1 |
| UCCAA | 1 |
| UUUAA | 1 |
| GGUAC | 1 |
| GAAGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| ACUAU | 1 |
| CCA | 1 |
| UUA | 1 |
| GUA | 1 |
| AAG | 1 |
Coloring options: