Motif HL_19727.1 Version HL_19727.1 of this group appears in releases 3.83 to 3.87
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6VMY_005 | 6VMY | 0.4274 | 6 | A | Cobalamin riboswitch | U | 333 | C | 334 | G | 341 | A | 342 | cWW | |
| 2 | HL_2JLT_001 | 2JLT | 0.0000 | 6 | A | R06 | G | 5 | G | 6 | A | 13 | C | 14 | cWW | cWW |
| 3 | HL_8UIW_003 | 8UIW | 0.3254 | 0 | N | azaaromatic riboswitch aptamer (yjdF RNA) | G | 74 | G | 75 | G | 82 | C | 83 | cWW | ncwW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCUGCGAGGA | 1 |
| GGUCCCAGAC | 1 |
| GGGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUGCGAGG | 1 |
| GUCCCAGA | 1 |
| GG | 1 |
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