#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 51-52-3
1 HL_5HR6_0025HR60.00004C tRNAC31C32C36C38G39cWWntSW
2 HL_5HR7_0055HR70.10584D tRNAC31C32C36C38G39cWWntSW

3D structures

Complete motif including flanking bases
SequenceCounts
CCUUUCACG2
Non-Watson-Crick part of the motif
SequenceCounts
CUUUCAC2

Release history

Release3.33.43.53.63.73.83.93.103.11
Date2018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-10-19
StatusNew id, 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-R-tSW
    Heat map statistics
    Min 0.11 | Avg 0.05 | Max 0.11
    Help

    Coloring options:

    HL_5HR6_002:HL_5HR6_002 = 0HL_5HR6_002:HL_5HR7_005 = 0.1058HL_5HR7_005:HL_5HR6_002 = 0.1058HL_5HR7_005:HL_5HR7_005 = 0HL_5HR6_002HL_5HR7_005Discrepancy0.000.020.040.060.080.10
    Copyright 2025 BGSU RNA group. Page generated in 0.8616 s
    Application loaded.