Motif HL_20920.1 Version HL_20920.1 of this group appears in releases 1.13 to 1.15
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-10 | 3-9 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4LVZ_001 | 4LVZ | 0 | 2 | A | THF riboswitch | A | 33 | A | 34 | U | 35 | G | 37 | G | 38 | A | 39 | U | 40 | G | 41 | U | 42 | G | 44 | U | 45 | cWW | cWW | tWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AAUGGGAUGUCGU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUGGGAUGUCG | 1 |
Release history
| Release | 1.13 | 1.14 | 1.15 |
|---|---|---|---|
| Date | 2014-03-29 | 2014-04-27 | 2014-06-15 |
| Status | New id, no parents | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_20920.1 | Only in the child motif |
|---|---|---|---|
| HL_82382.1 Compare | HL_4LVZ_001 | HL_1VWW_017 |
- Annotations
-
- (1)
- Basepair signature
- cWW-cWW-tWH-R-R-R-R-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: