Motif HL_21414.1 Version HL_21414.1 of this group appears in releases 3.89 to 3.90
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 3-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8VTW_004 | 8VTW | 0.0000 | 0 | 1A | LSU rRNA | G | 139 | G | 139|||A | G | 140 | A | 141 | A | 142 | C | 142|||A | cWW | |
| 2 | HL_3D2V_001 | 3D2V | 0.6653 | 0 | A | TPP riboswitch (THI element) | G | 17 | U | 18 | U | 19 | C | 20 | A | 21 | C | 22 | cWW | cWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGGAAC | 1 |
| GUUCAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGAA | 1 |
| UUCA | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F
- Heat map statistics
- Min 0.67 | Avg 0.33 | Max 0.67
Coloring options: