Motif HL_21419.2 Version HL_21419.2 of this group appears in releases 1.17 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1FJG_018 | 1FJG | 0.8668 | 2 | Mini UNCG (H) | A | SSU rRNA | G | 838 | C | 840 | C | 848 | cWW |
| 2 | HL_4P9R_001 | 4P9R | 0.0000 | 2 | A | RNA (189-MER) | C | 22 | C | 217 | G | 219 | cWW | |
| 3 | HL_4QCN_050 | 4QCN | 0.9603 | 3 | A | 23S Ribosomal RNA | C | 2226 | A | 2229 | G | 2231 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUCUC | 1 |
| CUCGG | 1 |
| CGGAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UCU | 1 |
| UCG | 1 |
| GGAU | 1 |
Release history
Parent motifs
| Parent motif | Common motif instances | Only in HL_21419.2 | Only in the parent motif |
|---|---|---|---|
| HL_21419.1 Compare | HL_1FJG_018, HL_4P9R_001 | HL_4QCN_050 |
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Mini UNCG (H) (1)
- Basepair signature
- cWW
- Heat map statistics
- Min 0.87 | Avg 0.65 | Max 1.10
Coloring options: