Motif HL_21419.1 Version HL_21419.1 of this group appears in releases 1.16 to 1.16
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1FJG_018 | 1FJG | 0.0000 | 2 | Mini UNCG (H) | A | SSU rRNA | G | 838 | C | 840 | C | 848 | cWW |
| 2 | HL_4P9R_001 | 4P9R | 0.8668 | 2 | A | RNA (189-MER) | C | 22 | C | 217 | G | 219 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUCUC | 1 |
| CUCGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UCU | 1 |
| UCG | 1 |
Release history
| Release | 1.16 |
|---|---|
| Date | 2014-07-26 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in HL_21419.1 | Only in the parent motif |
|---|---|---|---|
| HL_25878.1 Compare | HL_1FJG_018, HL_4P9R_001 | HL_3U5H_069, HL_3U5H_004, HL_4CUV_004 |
Children motifs
| Child motif | Common motif instances | Only in HL_21419.1 | Only in the child motif |
|---|---|---|---|
| HL_21419.2 Compare | HL_1FJG_018, HL_4P9R_001 | HL_4QCN_050 |
- Annotations
-
- Mini UNCG (H) (1)
- (1)
- Basepair signature
- cWW
- Heat map statistics
- Min 0.87 | Avg 0.43 | Max 0.87
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