Motif HL_22554.1 Version HL_22554.1 of this group appears in releases 3.80 to 3.86

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3		4		5		6		7		8		9	1-9	2-8	3-7
1	HL_8C3A_224	8C3A	0.0000	3	CM	SSU rRNA	A	1537	U	1538	U	1539	G	1540	U	1541	A	1542	A	1543	U	1547	U	1548	cWW	ncWH	tWH
2	HL_4V88_219	4V88	0.0967	3	A6	SSU rRNA	A	1550	U	1551	U	1552	G	1553	U	1554	A	1555	A	1556	U	1560	U	1561	cWW	ncWH	tWH

3D structures

Complete motif including flanking bases

Sequence	Counts
AUUGUAAUUGUU	1
AUUGUAAUUAUU	1

Non-Watson-Crick part of the motif

Sequence	Counts
UUGUAAUUGU	1
UUGUAAUUAU	1

Release history

Release	3.80	3.81	3.82	3.83	3.84	3.85	3.86
Date	2024-01-31	2024-02-28	2024-03-27	2024-04-24	2024-05-22	2024-06-19	2024-07-17
Status	New id, 1 parent	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (2)
Basepair signature: cWW-cWH-tWH-F-F-F
Heat map statistics: Min 0.10 | Avg 0.05 | Max 0.10

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