Motif HL_23569.1 Version HL_23569.1 of this group appears in releases 3.88 to 3.88
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-7 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8C3A_204 | 8C3A | 0.0000 | 1 | CM | SSU rRNA | C | 487 | C | 488 | C | 489 | U | 491 | U | 492 | U | 493 | G | 494 | G | 495 | cWW | |
| 2 | HL_8VM9_004 | 8VM9 | 0.7542 | 2 | R | RNA (85-MER) | G | 15 | G | 16 | U | 17 | C | 20 | C | 21 | C | 22 | A | 23 | C | 24 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCCUUUUGG | 1 |
| GGUAUCCCAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CCUUUUG | 1 |
| GUAUCCCA | 1 |
Release history
| Release | 3.88 |
|---|---|
| Date | 2024-09-11 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F-F-F
- Heat map statistics
- Min 0.75 | Avg 0.38 | Max 0.75
Coloring options: