Motif HL_25575.1 Version HL_25575.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1S03_001 | 1S03 | 0.0000 | 2 | A | 47-MER | A | 22 | G | 23 | G | 24 | A | 26 | A | 27 | U | 29 | cWW |
| 2 | HL_4KR7_002 | 4KR7 | 0.9270 | 0 | X | RNA (39-MER) | G | 19 | G | 20 | A | 21 | A | 22 | A | 23 | C | 24 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AGGCAAUU | 1 |
| GGAAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGCAAU | 1 |
| GAAA | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-R-R-R
- Heat map statistics
- Min 0.93 | Avg 0.46 | Max 0.93
Coloring options: