Motif HL_25762.1 Version HL_25762.1 of this group appears in releases 3.2 to 3.17
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-5 | 3-4 | 3-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3DIL_004 | 3DIL | 0.0000 | 0 | A | Lysine riboswitch | G | 149 | G | 150 | U | 151 | C | 152 | U | 153 | C | 154 | cWW | ncSW | ||
| 2 | HL_1QU2_002 | 1QU2 | 0.5900 | 3 | T | tRNA | C | 31 | C | 32 | U | 33 | U | 36 | A | 38 | G | 39 | cWW | ncWW | ntSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGUCUC | 1 |
| CCUGAUAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUCU | 1 |
| CUGAUAA | 1 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.2 | 3.11 | 3.12 | 3.13 | 3.14 | 3.15 | 3.16 | 3.17 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-09-26 | 2018-10-19 | 2018-11-16 | 2018-12-14 | 2019-01-11 | 2019-02-08 | 2019-03-08 | 2019-04-05 |
| Status | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-bif-R-R
- Heat map statistics
- Min 0.59 | Avg 0.29 | Max 0.59
Coloring options: