Motif HL_25967.2 Version HL_25967.2 of this group appears in releases 3.95 to 3.99
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8P9A_150 | 8P9A | 0.7240 | 1 | AR | LSU rRNA | C | 1759 | A | 1760 | C | 1761 | C | 1762 | U | 1763 | U | 1765 | G | 1766 | cWW | |
| 2 | HL_8P9A_149 | 8P9A | 0.0000 | 0 | AR | LSU rRNA | G | 1719 | U | 1720 | U | 1721 | U | 1722 | A | 1723 | U | 1724 | C | 1725 | cWW | cwW |
| 3 | HL_8CRE_037 | 8CRE | 0.1145 | 0 | 1 | LSU rRNA | G | 1715 | U | 1716 | U | 1717 | U | 1718 | A | 1719 | U | 1720 | C | 1721 | cWW | cwW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUUAUC | 2 |
| CACCUUUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUUAU | 2 |
| ACCUUU | 1 |
- Annotations
-
- (3)
- Basepair signature
- cWW-cWW-F-F-F
- Heat map statistics
- Min 0.11 | Avg 0.35 | Max 0.73
Coloring options: