Motif HL_27429.1 Version HL_27429.1 of this group appears in releases 0.1 to 0.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2ZJR_012 | 2ZJR | 0.0000 | 1 | X | LSU rRNA | G | 395 | U | 396 | U | 397 | C | 398 | U | 400 | G | 401 | A | 402 | A | 403 | A | 404 | C | 405 | cWW | |
| 2 | HL_2QBG_014 | 2QBG | 0.2683 | 1 | B | LSU rRNA | A | 382 | C | 383 | A | 384 | C | 385 | U | 387 | G | 388 | G | 389 | U | 390 | A | 391 | U | 392 | cWW | |
| 3 | HL_3PYO_013 | 3PYO | 0.3705 | 1 | A | LSU rRNA | G | 382 | U | 383 | U | 384 | C | 385 | U | 387 | G | 388 | G | 389 | A | 390 | G | 391 | C | 392 | cWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUCGUGAAAC | 1 |
| ACACGUGGUAU | 1 |
| GUUCGUGGAGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUCGUGAAA | 1 |
| CACGUGGUA | 1 |
| UUCGUGGAG | 1 |
Release history
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_27429.1 | Only in the child motif |
|---|---|---|---|
| HL_27429.2 Compare | HL_2QBG_014, HL_2ZJR_012 | HL_3PYO_013 | HL_3V2F_013 |
Coloring options: