Motif HL_30376.1 Version HL_30376.1 of this group appears in releases 0.1 to 0.1
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1WZ2_006 | 1WZ2 | 0 | 2 | Pseudoknot geometry | D | tRNA | A | 934 | C | 937 | A | 938 | A | 939 | G | 940 | A | 941 | U | 942 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| ACUCAAGAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUCAAGA | 1 |
Release history
| Release | 0.1 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_30376.1 | Only in the child motif |
|---|---|---|---|
| HL_31541.1 Compare | HL_1WZ2_006 | HL_2QBG_015, HL_3PYO_014, HL_2ZJR_013, HL_1WZ2_002 |
- Annotations
-
- Pseudoknot geometry (1)
- Basepair signature
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: