#SLoop idPDBDisc#Non-coreAnnotationChain(s) 1 2 3 4 5 6 71-7
1 HL_1WZ2_0061WZ20.00002Pseudoknot geometryDA934C937A938A939G940A941U942cWW
2 HL_2ZJR_0132ZJR0.33391XG423A425C426C427A428C429C430cWW
3 HL_2QBG_0152QBG0.63101BG410A412C413C414A415U416C417cWW
4 HL_3PYO_0143PYO0.68681AG410A412C413C414A415C416C417cWW
5 HL_1WZ2_0021WZ20.66542CA934C937A938A939G940A941U942cWW

3D structures

Complete motif including flanking bases
SequenceCounts
ACUCAAGAU2
GGACCACC2
GGACCAUC1
Non-Watson-Crick part of the motif
SequenceCounts
CUCAAGA2
GACCAC2
GACCAU1

Release history

Release0.2
Date2011-12-08
StatusNew id, 2 parents

Parent motifs

Children motifs

Child motifCommon motif instancesOnly in HL_31541.1Only in the child motif
HL_17723.1
Compare
HL_2QBG_015, HL_1WZ2_006, HL_2ZJR_013HL_3PYO_014, HL_1WZ2_002HL_3V2F_014, HL_3NPB_001, HL_4AOB_001, HL_3IVK_009, HL_3V7E_004, HL_3GX5_001
Annotations
  • (4)
  • Pseudoknot geometry (1)
  • Basepair signature
    Heat map statistics
    Min 0.15 | Avg 0.38 | Max 0.69
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