Motif HL_32095.1 Version HL_32095.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 1-3 | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | HL_5X6B_005 | 5X6B | 0.5125 | 6 | P | tRNA | U | 13 | A | 14 | A | 21 | ncWW |
2 | HL_3WQY_001 | 3WQY | 0.4824 | 6 | C | tRNA | C | 1613 | A | 1614 | G | 1622 | cWW |
3 | HL_2FMT_004 | 2FMT | 0.2547 | 8 | D | FORMYL-METHIONYL-TRNAFMET2 | C | 13 | A | 14 | G | 22 | cWW |
4 | HL_4V9F_003 | 4V9F | 0.0000 | 2 | 0 | LSU rRNA | G | 118 | A | 119 | C | 122 | cWW |
5 | HL_2Y9H_004 | 2Y9H | 0.1110 | 3 | H | RNA (19-mer) | C | 11 | G | 12 | G | 16 | cWW |
6 | HL_3AMU_002 | 3AMU | 0.2171 | 8 | B | tRNA | G | 30 | G | 31 | C | 40 | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UAGGGGCUA | 1 |
CAGCGGGAG | 1 |
CAGCCUGGAG | 1 |
GAAUC | 1 |
CGCGUG | 1 |
GGCUCAUAACC | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
AGGGGCU | 1 |
AGCGGGA | 1 |
AGCCUGG(H2U)A | 1 |
AAU | 1 |
GCGU | 1 |
GCUCAUAAC | 1 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.Coloring options: