Motif HL_32273.1 Version HL_32273.1 of this group appears in releases 3.62 to 3.76
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-6 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2DU3_001 | 2DU3 | 0.7994 | 3 | D | tRNA | A | 912 | G | 913 | A | 914 | G | 915 | G | 916 | U | 920 | U | 921 | U | 922 | cWW | ntSH | ||
| 2 | HL_5E6M_001 | 5E6M | 0.0000 | 3 | C | tRNA | G | 12 | U | 13 | A | 14 | G | 15 | U | 16 | A | 21 | U | 22 | C | 23 | cWW | cwW | cWS | |
| 3 | HL_4QEI_001 | 4QEI | 0.1243 | 3 | C | tRNA | G | 12 | U | 13 | A | 14 | G | 15 | U | 16 | A | 21 | U | 22 | C | 23 | cWW | cwW | cWS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUAGUGGUAUC | 2 |
| AGAGGGGCUUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAGUGGUAU | 2 |
| GAGGGGCUU | 1 |
Release history
| Release | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-cWW-cWS-R-R
- Heat map statistics
- Min 0.12 | Avg 0.39 | Max 0.82
Coloring options: