Motif HL_32608.1 Version HL_32608.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3J79_031 | 3J79 | 0.0000 | 2 | A | LSU rRNA | C | 1654 | U | 1655 | U | 1657 | G | 1658 | A | 1659 | U | 1661 | G | 1662 | cWW | cwW |
| 2 | HL_3J7P_082 | 3J7P | 0.9399 | 1 | S2 | SSU rRNA | C | 322 | C | 323 | C | 325 | C | 326 | G | 327 | U | 328 | G | 329 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUGUGAUUG | 1 |
| CCCCCGUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGUGAUU | 1 |
| CCCCGU | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-R-R
- Heat map statistics
- Min 0.94 | Avg 0.47 | Max 0.94
Coloring options: