Motif HL_33451.1 Version HL_33451.1 of this group appears in releases 0.3 to 1.18

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name for chain		1		2		3		4		5		6		7		8		9		10		11	1-11
1	HL_2NZ4_010	2NZ4	0.0000	2	R	glmS ribozyme	A	31	G	32	G	33	G	35	G	36	G	37	G	38	U	39	U	40	A	42	U	43	cWW
2	HL_2NZ4_014	2NZ4	0.0838	2	S	glmS ribozyme	A	31	G	32	G	33	G	35	G	36	G	37	G	38	U	39	U	40	A	42	U	43	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
AGGUGGGGUUUAU	2

Non-Watson-Crick part of the motif

Sequence	Counts
GGUGGGGUUUA	2

Release history

Release	0.3	0.4	0.5	0.6	0.7	0.8	1.0	1.1	1.2	1.3	1.4	1.5	1.6	1.7	1.8	1.9	1.10	1.11	1.12	1.13	1.14	1.15	1.16	1.17	1.18
Date	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-03-04	2013-04-06	2013-05-04	2013-06-01	2013-07-03	2013-08-03	2013-08-31	2013-09-28	2013-11-04	2013-12-07	2014-01-04	2014-02-01	2014-03-01	2014-03-29	2014-04-27	2014-06-15	2014-07-26	2014-09-06	2014-10-09
Status	New id, 1 parent	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

Parent motif	Common motif instances	Only in HL_33451.1	Only in the parent motif
HL_11061.2 Compare	HL_2NZ4_014, HL_2NZ4_010		HL_2NZ4_006, HL_2NZ4_002

Children motifs

This motif has no children motifs.

Annotations: (2)
Basepair signature: cWW-R-R-R-R-R-R-R-R
Heat map statistics: Min 0.08 | Avg 0.04 | Max 0.08

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Coloring options: Nucleotide numbers

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