#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 41-42-3
1 HL_6CZR_0746CZR0.38422GNRA1a SSU rRNAG153G154A157C158ncWWntSH
2 HL_1M5K_0031M5K0.20292GNRABRNA HAIRPIN RIBOZYMEG74G75A78C79cWWntSH
3 HL_2CZJ_0072CZJ0.00002UNCG variationHtmRNA (63-MER)G25U26G29C30cWW
4 HL_6N5P_0026N5P0.47273A cyclic di-AMP riboswitchG58U59G63C64ncWW
5 HL_7A0S_0467A0S0.48063X LSU rRNAC1797G1798A1802G1803cWWtSH
6 HL_5J7L_0265J7L0.41503GNRA (H)AA SSU rRNAU1165G1166A1170A1171cWWtSH
7 HL_8HNT_0028HNT0.48012BsgRNAU103G104A107G108cWW

3D structures

Complete motif including flanking bases
SequenceCounts
GGAAAC2
GUUCGC1
GUGAAGC1
CGAACAG1
UGAUAAA1
UGUAAG1
Non-Watson-Crick part of the motif
SequenceCounts
GAAA2
UUCG1
UGAAG1
GAACA1
GAUAA1
GUAA1

Release history

Release3.88
Date2024-09-11
StatusNew id, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • GNRA (2)
  • UNCG variation (1)
  • GNRA (H) (1)
  • Basepair signature
    cWW-F-F
    Heat map statistics
    Min 0.20 | Avg 0.42 | Max 0.76
    Help

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