Motif HL_36842.1 Version HL_36842.1 of this group appears in releases 0.3 to 1.13
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 2-8 | 3-6 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4A1B_033 | 4A1B | 0 | 0 | 1 | LSU rRNA | A | 1593 | C | 1594 | A | 1595 | U | 1596 | U | 1597 | C | 1598 | G | 1599 | U | 1600 | cWW | ncWW | ncWW | ntSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| ACAUUCGU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CAUUCG | 1 |
Release history
| Release | 0.3 | 0.4 | 0.5 | 0.6 | 0.7 | 0.8 | 1.0 | 1.1 | 1.2 | 1.3 | 1.4 | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-03-04 | 2013-04-06 | 2013-05-04 | 2013-06-01 | 2013-07-03 | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-04 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_36842.1 | Only in the child motif |
|---|---|---|---|
| HL_16728.1 Compare | HL_4A1B_033 | HL_4BPP_005 |
- Annotations
-
- (1)
- Basepair signature
- cWW-R-tSH-R-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: