Motif HL_38227.1 Version HL_38227.1 of this group appears in releases 0.1 to 0.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 1-4 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2ZUE_002 | 2ZUE | 0.0000 | 5 | B | tRNA-Arg | C | 931 | C | 932 | A | 937 | G | 939 | cWW |
| 2 | HL_2PJP_001 | 2PJP | 0.8337 | 0 | B | SECIS RNA | G | 22 | G | 23 | U | 24 | C | 25 | cWW |
| 3 | HL_2PLY_001 | 2PLY | 0.8422 | 0 | C | RNA (23-mer) | G | 22 | G | 23 | U | 24 | C | 25 | cWW |
| 4 | HL_2PLY_002 | 2PLY | 0.9726 | 0 | E | RNA (23-mer) | G | 22 | G | 23 | U | 24 | C | 25 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGUC | 3 |
| CCUCCUAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GU | 3 |
| CUCCUAA | 1 |
Release history
| Release | 0.1 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_38227.1 | Only in the child motif |
|---|---|---|---|
| HL_38227.2 Compare | HL_2PJP_001, HL_2PLY_002, HL_2PLY_001 | HL_2ZUE_002 | HL_3O58_045 |
| HL_42658.1 Compare | HL_2ZUE_002 | HL_2PJP_001, HL_2PLY_002, HL_2PLY_001 |
Coloring options: