#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name for chain 1 2 3 4 5 6 71-7
1 HL_3D2V_0023D2V0.00001T-loop relatedATPP riboswitch (THI element)G54G55U56A57A58U59C61cWW
2 HL_3K0J_0023K0J0.20591T-loop relatedETPP riboswitch (THI element)G66A67U68A69A70U71C73cWW

3D structures

Complete motif including flanking bases
SequenceCounts
GGUAAUGC1
GAUAAUGC1
Non-Watson-Crick part of the motif
SequenceCounts
GUAAUG1
AUAAUG1

Release history

Release3.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.57
Date2018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-27
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • T-loop related (2)
  • Basepair signature
    cWW-R-R-R-R
    Heat map statistics
    Min 0.21 | Avg 0.10 | Max 0.21
    Help

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