Motif HL_38701.1 Version HL_38701.1 of this group appears in releases 3.89 to 3.90
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8C3A_193 | 8C3A | 0.0000 | 2 | CM | SSU rRNA | C | 70 | A | 71 | A | 72 | U | 73 | U | 75 | A | 76 | A | 78 | C | 79 | A | 80 | G | 81 | cWW |
| 2 | HL_4V88_187 | 4V88 | 0.5559 | 2 | A6 | SSU rRNA | C | 70 | A | 71 | A | 72 | U | 73 | U | 75 | A | 76 | A | 78 | C | 79 | A | 80 | G | 81 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAAUUUAUACAG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAUUUAUACA | 2 |
- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Heat map statistics
- Min 0.56 | Avg 0.28 | Max 0.56
Coloring options: