Motif HL_39267.1 Version HL_39267.1 of this group appears in releases 3.77 to 3.84
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | 2-8 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2ZNI_002 | 2ZNI | 0.0000 | 0 | C | bacterial tRNA | A | 31 | C | 32 | U | 33 | C | 34 | U | 35 | A | 36 | A | 37 | A | 38 | U | 39 | cWW | cWW | |
| 2 | HL_2IY5_002 | 2IY5 | 0.4237 | 0 | tRNA anticodon loop | T | tRNA | A | 31 | C | 32 | U | 33 | G | 34 | A | 35 | A | 36 | A | 37 | A | 38 | U | 39 | cWW | ncWB |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| ACUCUAAAU | 1 |
| ACUGAAAAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUCUAAA | 1 |
| CUGAAAA | 1 |
Release history
| Release | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 |
|---|---|---|---|---|---|---|---|---|
| Date | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- tRNA anticodon loop (1)
- Basepair signature
- cWW-F-F-F-F-F-F
- Heat map statistics
- Min 0.42 | Avg 0.21 | Max 0.42
Coloring options: