Motif HL_39846.1 Version HL_39846.1 of this group appears in releases 1.15 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28 | 29 | 30 | 31 | 1-31 | 10-22 | 29-31 | |||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4CUX_017 | 4CUX | 0 | 2 | 2 | SSU rRNA | G | 703 | C | 704 | U | 705 | A | 706 | A | 707 | C | 708 | C | 709 | U | 710 | U | 711 | G | 712 | A | 713 | G | 714 | U | 715 | C | 716 | C | 717 | U | 718 | G | 720 | G | 722 | G | 723 | C | 724 | U | 725 | C | 726 | U | 727 | U | 728 | G | 729 | G | 730 | C | 731 | G | 732 | A | 733 | A | 734 | C | 735 | cWW | ncWS | ncSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCUAACCUUGAGUCCUUGUGGCUCUUGGCGAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUAACCUUGAGUCCUUGUGGCUCUUGGCGAA | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: